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PCdb
cancer lncRNA database
General information | Expression | lncRNA | Regulation | Mutation | Homolog | Interaction

Basic Information

Gene ID

2957

Name

GTF2A1

Synonymous

general transcription factor IIA, 1, 19/37kDa;GTF2A1;general transcription factor IIA, 1, 19/37kDa

Definition

TFIIA alpha, p55|general transcription factor IIA subunit 1|glucose regulated protein, 58kD pseudogene|transcription initiation factor IIA subunit 1|transcription initiation factor TFIIA 42 kDa subunit

Position

14q31.1

Gene Type

protein-coding

Gene Regulation:

Transcription Factors
Post Translational Modification From dbPTM
Methylation Profile From DiseaseMeth database

Transcription Factors   [Top]

Regulation From TransFac database

TFIIA-gamma(h) + TFIIA-alpha/beta precursor (major)(h) <==> TFIIA-gamma(h):TFIIA-alpha/beta precursor (major)(h) (binding).
TFIIA-alpha/beta precursor (major)(h) --> IVa2 promoter(AD2) (DNA binding).
TFIIA-alpha/beta precursor (major)(h) --> HIV-1(HIV1) (DNA binding).
TFIIA-alpha/beta precursor (major)(h) --> MLP(AD) (DNA binding).
GTF2A1(h) --> TFIIA-alpha/beta precursor (major)(h) (expression).
TFIIA-alpha/beta precursor (minor)(h) --> MLP(AD) (DNA binding).
TFIIA-alpha/beta precursor (minor)(h) --> IVa2 promoter(AD2) (DNA binding).
TFIIA-alpha/beta precursor (minor)(h) --> HIV-1(HIV1) (DNA binding).
GTF2A1(h) --> TFIIA-alpha/beta precursor (minor)(h) (expression).
TBPL1(h) + TFIIA-alpha/beta precursor(h) <==> TBPL1(h):TFIIA-alpha/beta precursor(h) (binding)
GTF2A1(h) --> TFIIA-alpha/beta precursor(h) (expression).

Post Translational Modification   [Top]

Location (AA)

PTM type

Literature

Database

280Phosphoserine (by TAF1).Swiss-Prot 53.0
281Phosphoserine (by TAF1).Swiss-Prot 53.0
316Phosphoserine (by TAF1).Swiss-Prot 53.0
321Phosphoserine (by TAF1).Swiss-Prot 53.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr14

Promoter: 80756547 - 80758547Agilent_014791

chr14

Promoter: 80756828 - 80758828Agilent_014791

chr14

Promoter: 80756828 - 80758828GSE27584

chr14

Promoter: 80756547 - 80758547GSE27584

chr14

Promoter: 80756547 - 80758547Agilent_014791_44K


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