Note for all cancer types used in the table above |
| BLCA, bladder urothelial carcinoma carcinoma |
| BRCA, breast invasive carcinoma |
| COAD, colon adenocarcinoma |
| HNSC, head and neck squamous cell carcinoma |
| KIRC, kidney renal clear cell carcinoma |
| LUAD, lung adenocarcinoma |
| LAML, acute myeloid leukemia |
| LUSC, lung squamous cell carcinoma |
| OV, high-grade serous ovarian cancer |
| READ, rectum adenocarcinoma |
| UCEC, uterine corpus endometrial carcinoma |
|
Note for all cancer genes integrated from public cancer genomics resources in the above table |
| tumor suppressor, human tumor suppressors from TSGene database |
| human oncogenes collected from M Zhao, J Sun, Z Zhao. PloS one 7 (8), e44175 |
| Atlas, the atlas of genetics and cytogenetics in oncology and haematology, an interactive database. Nucleic Acids Res. 2000 Jan 1;28(1):349-51. |
| CANgenes, the consensus coding sequences of human breast and colorectal cancers. Science. 2006 Oct 13;314(5797):268-74 |
| CIS, RTCGD: retroviral tagged cancer gene database. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D523-7. |
| Human Lymphoma, a list of lymphoid-specific oncogenes compiled by Marina Cavazzana-Calvo and colleagues from bushman lab site |
| Cancer census gene list, a census of human cancer genes. Nature Reviews Cancer 4, 177-183 (March 2004) |
| Waldman, the cancer genes sorted by chromosomal locus, with links to OMIM |
| Vogelstein, the cancer genes related to chromosomal breakpoints; Science. 2013 Mar 29;339(6127):1546-58 |
| Other collection, from Cold Spring Harbor Retroviruses Chapter on Oncogenes, an early version of the CIS database, a list from Dr. Tony Hunter, and misc. additions from the literature, see bushman lab site. |
