cancer lncRNA gene database (PCdb) Home
PCdb
cancer lncRNA database

Basic Information

Gene ID in MiTranscriptome

G000796

Transcript ID

T004105

Transcript Name

CMAT27

Chromosome

chr1

Start

16943602

End

16969345

Strand

-

Transcript length

9511

Entrez ID

none_GeneID

Number of exon

11

Annotation summary

"Multi-exonic transcripts that overlap existing annotations on the same strand and have at least one shared splice junction."

Annotation confidence detail

Confidence Score: 0.820624863; Annotated: annotated; Intergenic: intergenic; Coding potential prediction: 0.96804954

Pfam for translated ORF

"PB001264,PB002759,PB003142,PB003725,PB004909,PB006123,PB007520,PB009615,PB009838,PB011199,PB011975,PB012297,PB017424,PF13900.1"

Conservation on the genome

FALSE

Human lncRNA expression profile from MiTranscriptome

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